File:Prymnesium parvum Gr4 lrg.jpg

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Identification of structural changes in the largest polyketide synthases in ''Prymnesium parvum'' type B versus type A

Summary

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Description
English: PKZILLA-1 deletion in four additional Prymnesium parvum type B strains (green: K-0081, K-0374, KAC-39, and RCC3426) compared with two type A strains (blue: CMP3037 and UTEX2797), as revealed by short-read mapping to the genomic region of type A PKZILLA-1 (from the genome assembly of CCMP3037). Due to the repetitive nature of the PKZILLA-1 gene, large parts cannot be covered by uniquely mapped reads. Non-uniquely mapped reads are randomly distributed between two larger regions (light blue) that exhibit reduced (∼50%) read coverage in type B, indicating a deletion in type B or a duplication in type A. Borders of the left region do not have any read coverage (red), further supporting the deletion of this part of the gene in type B strains.
Date
Source The haplotype-resolved Prymnesium parvum (type B) microalga genome reveals the genetic basis of its fish-killing toxins. In: Current Biology (2024). doi:10.1016/j.cub.2024.06.033
Author Heiner Kuhl, Jürgen F. H. Strassert, Dora Čertnerová, Elisabeth Varga, Eva Kreuz, Dunja K. Lamatsch, Sven Wuertz, Jan Köhler, Michael T. Monaghan, Matthias Stöck
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current12:53, 11 July 2024Thumbnail for version as of 12:53, 11 July 20242,917 × 1,359 (479 KB)Ernsts (talk | contribs)Uploaded a work by Heiner Kuhl, Jürgen F. H. Strassert, Dora Čertnerová, Elisabeth Varga, Eva Kreuz, Dunja K. Lamatsch, Sven Wuertz, Jan Köhler, Michael T. Monaghan, Matthias Stöck from ''The haplotype-resolved ''Prymnesium parvum'' (type B) microalga genome reveals the genetic basis of its fish-killing toxins.'' In: ''Current Biology'' (2024). doi:10.1016/j.cub.2024.06.033 with UploadWizard

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