File:Dynamics-of-the-quorum-sensing-switch-stochastic-and-non-stationary-effects-1752-0509-7-6-S2.ogv
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DescriptionDynamics-of-the-quorum-sensing-switch-stochastic-and-non-stationary-effects-1752-0509-7-6-S2.ogv |
English: Video S1. Movie of the stochastic simulation. Movie of the stochastic simulation for the lux02 operon, 10 h of induction at cA∗=50nM, burst size bR=bI=4. Cells are modelled as individual compartments containing a copy of the LuxR/LuxI regulatory network. The Gillespie algorithm (see text for details) is used to integrate the stochastic dynamics of the whole system of cells. Cell growth and division is explicitly taken into account as well as a certain degree of stochasticity in the cell cycle duration. Cells movement is purely aesthetic since we do not include any spatial effects in our model and consider a well-mixed environment. The number of cells (N=100) is maintained constant by removing one cell at random each time a cell divides. |
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Date | |||
Source | Weber M, Buceta J (2013). "Dynamics of the quorum sensing switch: stochastic and non-stationary effects". BMC Systems Biology. DOI:10.1186/1752-0509-7-6. PMID 23324134. PMC: 3614889. | ||
Author | Weber M, Buceta J | ||
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This file is licensed under the Creative Commons Attribution 2.0 Generic license.
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Date/Time | Thumbnail | Dimensions | User | Comment | |
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current | 04:03, 8 April 2013 | 1 min 30 s, 608 × 608 (55.9 MB) | Open Access Media Importer Bot (talk | contribs) | Automatically uploaded media file from Open Access source. Please report problems or suggestions here. |
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Short title | Additional file 2 |
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Author | Weber M, Buceta J |
Usage terms | http://creativecommons.org/licenses/by/2.0/ |
Image title | Video S1. Movie of the stochastic simulation. Movie of the stochastic simulation for the lux02 operon, 10 h of induction at cA? |
Software used | Xiph.Org libtheora 1.1 20090822 (Thusnelda) |
Date and time of digitizing | 2013 |