File:Conformational-Sampling-and-Nucleotide-Dependent-Transitions-of-the-GroEL-Subunit-Probed-by-pcbi.1002004.s005.ogv

From Wikimedia Commons, the free media repository
Jump to navigation Jump to search

Conformational-Sampling-and-Nucleotide-Dependent-Transitions-of-the-GroEL-Subunit-Probed-by-pcbi.1002004.s005.ogv ‎(Ogg Theora video file, length 1 min 40 s, 480 × 480 pixels, 319 kbps, file size: 3.8 MB)

Captions

Captions

Add a one-line explanation of what this file represents

Summary[edit]

Description
English: Time-dependent conformer plot of the 300 ns ATP-bound simulation. Projection of X-ray (contoured grey dots) and MD (blue) structures (along the simulation time) onto the two most significant principal planes defined by 287 GroEL experimentally obtained structures. The distribution of MD structures is depicted with density shaded blue points. Orange, red, and green dots represent the closed (t), semi-relaxed (r), and open (r″) X-ray structures, respectively. Gray dashed line depicts the average pathway of the conformational sampling.
Date
Source Video S1 from Skjaerven L, Grant B, Muga A, Teigen K, McCammon J, Reuter N, Martinez A (2011). "Conformational Sampling and Nucleotide-Dependent Transitions of the GroEL Subunit Probed by Unbiased Molecular Dynamics Simulations". PLOS Computational Biology. DOI:10.1371/journal.pcbi.1002004. PMID 21423709. PMC: 3053311.
Author Skjaerven L, Grant B, Muga A, Teigen K, McCammon J, Reuter N, Martinez A
Permission
(Reusing this file)
w:en:Creative Commons
attribution
This file is licensed under the Creative Commons Attribution 2.5 Generic license.
You are free:
  • to share – to copy, distribute and transmit the work
  • to remix – to adapt the work
Under the following conditions:
  • attribution – You must give appropriate credit, provide a link to the license, and indicate if changes were made. You may do so in any reasonable manner, but not in any way that suggests the licensor endorses you or your use.
PLOS
PLOS
This file was published in a Public Library of Science journal. Their website states that the content of all PLOS journals is published under the Creative Commons Attribution 4.0 license (or its previous version depending on the publication date), unless indicated otherwise.
Provenance
InfoField
This file was transferred to Wikimedia Commons from PubMed Central by way of the Open Access Media Importer.
WikiProject Open Access
WikiProject Open Access

File history

Click on a date/time to view the file as it appeared at that time.

Date/TimeThumbnailDimensionsUserComment
current18:57, 16 November 20121 min 40 s, 480 × 480 (3.8 MB)Open Access Media Importer Bot (talk | contribs)Automatically uploaded media file from Open Access source. Please report problems or suggestions here.

You cannot overwrite this file.

There are no pages that use this file.

Transcode status

Update transcode status
Format Bitrate Download Status Encode time
VP9 480P 157 kbps Completed 15:59, 22 August 2018 42 s
Streaming 480p (VP9) 157 kbps Completed 00:15, 25 January 2024 1.0 s
VP9 360P 73 kbps Completed 15:59, 22 August 2018 45 s
Streaming 360p (VP9) 73 kbps Completed 16:24, 5 February 2024 1.0 s
VP9 240P 40 kbps Completed 15:58, 22 August 2018 24 s
Streaming 240p (VP9) 40 kbps Completed 03:24, 14 December 2023 2.0 s
WebM 360P 344 kbps Completed 22:47, 17 November 2012 44 s
Streaming 144p (MJPEG) 1.01 Mbps Completed 11:42, 2 November 2023 3.0 s

Metadata

This file contains additional information such as Exif metadata which may have been added by the digital camera, scanner, or software program used to create or digitize it. If the file has been modified from its original state, some details such as the timestamp may not fully reflect those of the original file. The timestamp is only as accurate as the clock in the camera, and it may be completely wrong.

Retrieved from "https://commons.wikimedia.org/w/index.php?title=File:Conformational-Sampling-and-Nucleotide-Dependent-Transitions-of-the-GroEL-Subunit-Probed-by-pcbi.1002004.s005.ogv&oldid=867365904"