File:An-Integrated-Framework-Advancing-Membrane-Protein-Modeling-and-Design-pcbi.1004398.s008.ogv
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DescriptionAn-Integrated-Framework-Advancing-Membrane-Protein-Modeling-and-Design-pcbi.1004398.s008.ogv |
English: Real-Time Visualization of Membrane Simulation in PyMOL. Visualization of a symmetric docking simulation of the protein complex potassium channel KcsA (PDB ID 1bl8). For every conformational change in the simulation, Rosetta sends an updated structure to PyMOL via the PyMOL Mover. The new structure is displayed in real-time in PyMOL. Asymmetric subunits colored independently. The complex is first assembled from a single asymmetric subunit, docked in low-resolution, and then refined in high-resolution. |
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Source | S1 Movie from Alford R, Koehler Leman J, Weitzner B, Duran A, Tilley D, Elazar A, Gray J (2015). "An Integrated Framework Advancing Membrane Protein Modeling and Design". PLOS Computational Biology. DOI:10.1371/journal.pcbi.1004398. PMID 26325167. PMC: 4556676. | ||
Author | Alford R, Koehler Leman J, Weitzner B, Duran A, Tilley D, Elazar A, Gray J | ||
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This file is licensed under the Creative Commons Attribution 4.0 International license.
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Date/Time | Thumbnail | Dimensions | User | Comment | |
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current | 13:56, 18 October 2016 | 21 s, 1,068 × 600 (14.28 MB) | Open Access Media Importer Bot (talk | contribs) | Automatically uploaded media file from Open Access source. Please report problems or suggestions here. |
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Short title | Real-Time Visualization of Membrane Simulation in PyMOL. |
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Author | Alford R, Koehler Leman J, Weitzner B, Duran A, Tilley D, Elazar A, Gray J |
Usage terms | http://creativecommons.org/licenses/by/4.0/ |
Image title | Visualization of a symmetric docking simulation of the protein complex potassium channel KcsA (PDB ID 1bl8). For every conformational change in the simulation, Rosetta sends an updated structure to PyMOL via the PyMOL Mover. The new structure is displayed in real-time in PyMOL. Asymmetric subunits colored independently. The complex is first assembled from a single asymmetric subunit, docked in low-resolution, and then refined in high-resolution. |
Software used | Xiph.Org libtheora 1.1 20090822 (Thusnelda) |
Date and time of digitizing | 2015-09-01 |