File:Wrangling-Phosphoproteomic-Data-to-Elucidate-Cancer-Signaling-Pathways-pone.0052884.s011.ogv
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[edit]DescriptionWrangling-Phosphoproteomic-Data-to-Elucidate-Cancer-Signaling-Pathways-pone.0052884.s011.ogv |
English: SED dissimilarity embedded in three dimensions using t-SNE graphed as in Movie S1. 49 groups of proteins (identified by different colors) were selected using a minimum spanning tree method [63], which finds groups that can be connected by a single linkage, filtered by low percent NA in the primary data. The start of the movie shows all proteins not in these groups (green); these were filtered out for the final scenes. |
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Source | Movie S2 from Grimes M, Lee W, van der Maaten L, Shannon P (2013). "Wrangling Phosphoproteomic Data to Elucidate Cancer Signaling Pathways". PLOS ONE. DOI:10.1371/journal.pone.0052884. PMID 23300999. PMC: 3536783. | ||
Author | Grimes M, Lee W, van der Maaten L, Shannon P | ||
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Date/Time | Thumbnail | Dimensions | User | Comment | |
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current | 15:55, 12 January 2013 | 34 s, 902 × 720 (17.03 MB) | Open Access Media Importer Bot (talk | contribs) | Automatically uploaded media file from Open Access source. Please report problems or suggestions here. |
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Author | Grimes M, Lee W, van der Maaten L, Shannon P |
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Usage terms | http://creativecommons.org/licenses/by/3.0/ |
Image title | SED dissimilarity embedded in three dimensions using t-SNE graphed as in Movie S1. 49 groups of proteins (identified by different colors) were selected using a minimum spanning tree method [63], which finds groups that can be connected by a single linkage, filtered by low percent NA in the primary data. The start of the movie shows all proteins not in these groups (green); these were filtered out for the final scenes. |
Software used | Xiph.Org libtheora 1.1 20090822 (Thusnelda) |
Date and time of digitizing | 2013 |
Categories:
- Biological data management
- Signaling networks
- Videos of systems biology
- Molecular cell biology
- Signal transduction
- Signaling cascades
- Protein kinase signaling cascade
- Tyrosine kinase signaling cascade
- Videos of cell signaling
- Videos of protein interactions
- Videos of proteomics
- Basic cancer research
- Media from PLOS ONE