File:Spatial ancestry analysis of Chilean and others.jpg
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[edit]DescriptionSpatial ancestry analysis of Chilean and others.jpg |
English: Spatial ancestry analysis of Chilean population. (a) All populations, (b) Chilean and African populations, (c) Chilean and European populations and (d) Chilean and Native-American populations. Chileans appear in black with its global African, European and Native-American ancestry proportions in (b), (c) and (d), respectively, as estimated by local ancestry methods. Figure a shows that the spatial analysis clearly separates the three ancestral population and, as expected, the admixed Chileans are scattered between the European and the Native-Americans. We restrict our spatial analysis to the Chileans with each of its ancestral populations. Figure b shows the Chilean-admixed population clearly separated from the African populations. Within Africans, the Yoruba in Ibadan, Nigeria (YRI) and the Luhya in Webuye, Kenya (LWK) are close together, but the African Ancestry from Southwest United States (ASW) is spread along a line and is the closest to the Chileans. Figure c shows that the Europeans are separated into two groups, Britain (GBR) and North Europe (CEU) together and Spaniards and Italians together, closer to the Chileans. Figure d shows the Chileans together with the Native-Americans. Figure b–d shows the Chileans with their global proportion of African, European and Native-American ancestry, respectively, estimated by the LAI method. We observe consistency between the ancestral proportion estimates given by the LAI (Local ancestry inference) methods and the spatial ancestry analysis as individuals with higher/lower proportion in ancestry are closer/farther to the ancestral populations. |
Date | Published 17 March 2015 |
Source | Susana Eyheramendy et al. "Genetic structure characterization of Chileans reflects historical immigration patterns." Nature Communications 6, Article number: 6472 doi:10.1038/ncomms7472 http://www.nature.com/ncomms/2015/150317/ncomms7472/full/ncomms7472.html |
Author | Susana Eyheramendy, Felipe I. Martinez, Federico Manevy, Cecilia Vial & Gabriela M. Repetto |
Other versions |
ID | country | description | Group | Sample size | Source |
CHL | Chile | Chilean | CHL | 313 | This study |
AYM | Aymara | NAT | 25 | Bigham, A (2009), Bigham, A (2010) | |
QUE | Quechua | NAT | 24 | Bigham, A (2009), Bigham, A (2010) | |
NAH | Mexico | Nahua, Mixtec, Tlapanec | NAT | 14 | Bigham, A (2009), Bigham, A (2010) |
MAY | Maya | NAT | 25 | Bigham, A (2009), Bigham, A (2010) | |
CEU | United States of America | Utah residents with Northern and Western European ancestry from the CEPH collection | EUR | 85 | 1000 Genomes Project |
GBR | United Kingdom | British | EUR | 89 | 1000 Genomes Project |
IBS | Spain | Iberians from Spain | EUR | 14 | 1000 Genomes Project |
SPN | Spain | EUR | 625 | POPRES | |
TSI | Italy | Toscani in Italy | EUR | 98 | 1000 Genomes Project |
ASW | United States of America | African Ancestry from Southwest United States | AFR | 56 | 1000 Genomes Project |
LWK | Kenya | Luhya in Webuye, Kenya | AFR | 85 | 1000 Genomes Project |
YRI | Nigeria | Yoruba in Ibadan, Nigeria | AFR | 88 | 1000 Genomes Project |
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current | 11:39, 12 June 2016 | 946 × 778 (102 KB) | Was a bee (talk | contribs) | {{Information |Description={{en|1=Spatial_ancestry_analysis_of_Chilean population. ('''a''') All populations, ('''b''') Chilean and African populations, ('''c''') Chilean and European populations and ('''d''') Chilean and Native-American populations. C... |
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Categories:
- Principal component analysis of human genetic diversity
- Genetic studies on Chileans
- Genetic studies of indigenous populations of the Americas
- Genetic studies on African populations
- Genetic studies on European populations
- Genetic studies on Yoruba
- Genetic studies on Luhya
- Genetic studies on African Americans
- Genetic studies on Tuscans
- Genetic studies on British
- Genetic studies on Spanish
- Genetic studies on Maya
- Genetic studies on Quechua
- Genetic studies on Nahuas
- Genetic studies on Aymara
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