File:Fast-online-deconvolution-of-calcium-imaging-data-pcbi.1005423.s003.ogv
From Wikimedia Commons, the free media repository
Jump to navigation
Jump to search
Size of this JPG preview of this OGG file: 800 × 320 pixels. Other resolutions: 320 × 128 pixels | 1,080 × 432 pixels.
Original file (Ogg Theora video file, length 1 min 8 s, 1,080 × 432 pixels, 235 kbps, file size: 1.9 MB)
File information
Structured data
Captions
Summary
[edit]DescriptionFast-online-deconvolution-of-calcium-imaging-data-pcbi.1005423.s003.ogv |
English: Illustration of OASIS. The supplementary video illustrates OASIS for an AR(1) process. As in Fig 2, red lines depict true spike times and the shaded background shows how the time points are gathered in pools. The pool currently under consideration is indicated by the blue crosses. The upper panel shows how the calcium fluorescence trace c′ develops while the algorithm runs, cf. Fig 2. The video additionally shows the deconvolved trace s′ = Gc′ (Eq 3) in the lower panel. The algorithm sweeps through the time series and enforces the constraint s′ ≥ 0. |
||
Date | |||
Source | S2 Video from Friedrich J, Zhou P, Paninski L (2017). "Fast online deconvolution of calcium imaging data". PLOS Computational Biology. DOI:10.1371/journal.pcbi.1005423. PMID 28291787. PMC: 5370160. | ||
Author | Friedrich J, Zhou P, Paninski L | ||
Permission (Reusing this file) |
This file is licensed under the Creative Commons Attribution 4.0 International license.
|
||
Provenance InfoField |
|
File history
Click on a date/time to view the file as it appeared at that time.
Date/Time | Thumbnail | Dimensions | User | Comment | |
---|---|---|---|---|---|
current | 07:40, 21 May 2017 | 1 min 8 s, 1,080 × 432 (1.9 MB) | Open Access Media Importer Bot (talk | contribs) | Automatically uploaded media file from Open Access source. Please report problems or suggestions here. |
You cannot overwrite this file.
File usage on Commons
There are no pages that use this file.
Transcode status
Update transcode statusMetadata
This file contains additional information such as Exif metadata which may have been added by the digital camera, scanner, or software program used to create or digitize it. If the file has been modified from its original state, some details such as the timestamp may not fully reflect those of the original file. The timestamp is only as accurate as the clock in the camera, and it may be completely wrong.
Short title | Illustration of OASIS. |
---|---|
Author | Friedrich J, Zhou P, Paninski L |
Usage terms | http://creativecommons.org/licenses/by/4.0/ |
Image title | The supplementary video illustrates OASIS for an AR(1) process. As in Fig 2, red lines depict true spike times and the shaded background shows how the time points are gathered in pools. The pool currently under consideration is indicated by the blue crosses. The upper panel shows how the calcium fluorescence trace c′ develops while the algorithm runs, cf. Fig 2. The video additionally shows the deconvolved trace s′ |
Software used | Xiph.Org libtheora 1.1 20090822 (Thusnelda) |
Date and time of digitizing | 2017-03 |
Structured data
Items portrayed in this file
depicts
March 2017
1,988,034 byte
67.75 second
432 pixel
1,080 pixel
application/ogg
b0186fc173d3f67b85a3ee47ad14528be9d46049
Categories:
- Membrane potential
- Action potentials
- Videos of applied mathematics
- Medical imaging
- Calcium imaging
- Videos of cell biology
- Videos of cell types
- Videos of animal cells
- Cellular neuroscience
- Signal transduction
- Videos of cell signaling
- Calcium signaling
- Fluorescence imaging
- Videos of classical mechanics
- Osmotic pressure