File:Defects-in-Mitochondrial-Dynamics-and-Metabolomic-Signatures-of-Evolving-Energetic-Stress-in-Mouse-pone.0032737.s002.ogv
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Defects-in-Mitochondrial-Dynamics-and-Metabolomic-Signatures-of-Evolving-Energetic-Stress-in-Mouse-pone.0032737.s002.ogv (Ogg Theora video file, length 27 s, 640 × 480 pixels, 1.8 Mbps, file size: 5.8 MB)
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[edit]DescriptionDefects-in-Mitochondrial-Dynamics-and-Metabolomic-Signatures-of-Evolving-Energetic-Stress-in-Mouse-pone.0032737.s002.ogv |
English: Animated 3D reconstruction of mitochondrial structure in Hip tissue of APP/PS1 mouse 24 weeks of age. For 3D reconstruction of the mitochondrial structure, the grayscale of the individual EM section images was first inverted so that the organelle became bright objects. The inverted images were then sequentially co registered using the Normalized Mutual Information 2D registration program in Analyze [84]. This is an automated procedure that aligns similar images based on the statistical distribution of paired pixels compared to the distribution in either image alone. The inverted, co-registered stack was then rendered using Maximum Intensity Projection. Each pixel in the rendered image represents the brightest voxel in a ray from the viewers' eye through the entire stack of sections. |
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Source | Movie S2 from Trushina E, Nemutlu E, Zhang S, Christensen T, Camp J, Mesa J, Siddiqui A, Tamura Y, Sesaki H, Wengenack T, Dzeja P, Poduslo J (2012). "Defects in Mitochondrial Dynamics and Metabolomic Signatures of Evolving Energetic Stress in Mouse Models of Familial Alzheimer's Disease". PLOS ONE. DOI:10.1371/journal.pone.0032737. PMID 22393443. PMC: 3290628. | ||
Author | Trushina E, Nemutlu E, Zhang S, Christensen T, Camp J, Mesa J, Siddiqui A, Tamura Y, Sesaki H, Wengenack T, Dzeja P, Poduslo J | ||
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Date/Time | Thumbnail | Dimensions | User | Comment | |
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current | 15:41, 30 October 2012 | 27 s, 640 × 480 (5.8 MB) | Open Access Media Importer Bot (talk | contribs) | Automatically uploaded media file from Open Access source. Please report problems or suggestions here. |
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Author | Trushina E, Nemutlu E, Zhang S, Christensen T, Camp J, Mesa J, Siddiqui A, Tamura Y, Sesaki H, Wengenack T, Dzeja P, Poduslo J |
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Usage terms | http://creativecommons.org/licenses/by/3.0/ |
Image title | Animated 3D reconstruction of mitochondrial structure in Hip tissue of APP/PS1 mouse 24 weeks of age. For 3D reconstruction of the mitochondrial structure, the grayscale of the individual EM section images was first inverted so that the organelle became bright objects. The inverted images were then sequentially co registered using the Normalized Mutual Information 2D registration program in Analyze [84]. This is an automated procedure that aligns similar images based on the statistical distribution of paired pixels compared to the distribution in either image alone. The inverted, co-registered stack was then rendered using Maximum Intensity Projection. Each pixel in the rendered image represents the brightest voxel in a ray from the viewers' eye through the entire stack of sections. |
Software used | Xiph.Org libtheora 1.1 20090822 (Thusnelda) |
Date and time of digitizing | 2012 |
Categories:
- Videos of Alzheimer's disease
- Mouse model of Alzheimer’s disease
- Amyloid
- Biological markers
- Videos of brain
- Animal models of disease
- Disease progression
- Videos of hippocampus (anatomy)
- Metabolomics
- Inbred C57BL mice
- Transgenic mice
- Videos of neuronal mitochondria
- Presenilin-1
- Time factors
- Media from PLOS ONE
- Image registration