File:Clustering of PASNP population groups by selection signals.jpg
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[edit]DescriptionClustering of PASNP population groups by selection signals.jpg |
English: Clustering of PASNP (HUGO Pan-Asian SNP Consortium) population groups by selection signals. Hierarchical clustering of the 31 PASNP population groups according to the absence or presence of the 59 positive selection signals that have been identified by haploPS. Each of the 59 signals is present in at least one of the 31 population groups. The hierarchical clustering is performed using the Ward’s minimum variance method with the hclust command in R. Populations found in one of the major branches correspond to indigenous populations from Malaysia, Philippines, Thailand and China (upper purple box), while populations found in one of the sub-branches correspond to those in northern East Asia (lower red box). |
Date | Published: 2 May 2014 |
Source | Xuanyao Liu, Woei-Yuh Saw, Mohammad Ali, Rick Twee-Hee Ong and Yik-Ying Teo, "Evaluating the possibility of detecting evidence of positive selection across Asia with sparse genotype data from the HUGO Pan-Asian SNP Consortium" BMC Genomics 201415:332 DOI: 10.1186/1471-2164-15-332 http://bmcgenomics.biomedcentral.com/articles/10.1186/1471-2164-15-332 |
Author | Xuanyao Liu, Woei-Yuh Saw, Mohammad Ali, Rick Twee-Hee Ong and Yik-Ying Teo |
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current | 20:59, 28 June 2016 | 546 × 568 (75 KB) | Was a bee (talk | contribs) | == {{int:filedesc}} == {{Information |Description={{en|1=Clustering of PASNP (HUGO Pan-Asian SNP Consortium) population groups by selection signals. Hierarchical clustering of the 31 PASNP population groups according to the absence or presence of the 5... |
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Categories:
- Genetic studies on Asian populations
- Genetic studies on Ryukyuan people
- Genetic studies on Filipinos
- Phylogenetic tree of human populations
- Genetic studies on Indian
- Genetic studies on Indonesians
- Genetic studies on Japanese
- Genetic studies on Korean
- Genetic studies on Chinese
- Genetic studies on Javanese
- Genetic studies on Negrito
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