File:Simulation of bacterial swimming dynamics.jpg
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DescriptionSimulation of bacterial swimming dynamics.jpg |
English: Simulation configuration of Serratia marcescens in BNSim and single particle tracking of S. marcescens during experiments. (a) In case 1 for simulation in BNSim, a cubic environment with dimensions 5000 × 5000 × 5000 µm3 has been considered. The whole environment subdivided into 106 smaller cubes, each with a size of 50 × 50 × 50 µm3. We consider a linear gradient (10−4 mM µm−1) of chemoattractant (l-aspartate) only in the y-direction and no gradient in other directions. (b) In case 2 for simulation in BNSim, we consider the same configuration as in case 1 for bacteria and the environment. We only changed the gradient of chemoattractant in the environment. In this case, we consider a linear gradient of chemoattractant (l-aspartate) from the injection location to the targets, meaning that there is a linear gradient in 3 different dimensions. (c) Single particle tracking of S. marcescens in an in vitro environment with dimensions of 10000 × 500 × 150 µm3 with linear gradient (10−4 mM µm−1) of chemoattractant (l-aspartate) in the second direction (y-direction). |
Date | |
Source | [1] doi:10.6084/m9.figshare.c.3811489 |
Author | Hana Koorehdavoudi, Paul Bogdan, Guopeng Wei, Radu Marculescu, Jiang Zhuang, Rika Wright Carlsen and Metin Sitti |
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current | 22:50, 8 June 2021 | 1,192 × 1,280 (145 KB) | Epipelagic (talk | contribs) | Uploaded a work by Hana Koorehdavoudi, Paul Bogdan, Guopeng Wei, Radu Marculescu, Jiang Zhuang, Rika Wright Carlsen and Metin Sitti from [https://royalsocietypublishing.org/doi/10.1098/rspa.2017.0154] {{doi|10.6084/m9.figshare.c.3811489}} with UploadWizard |
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