File:Phylogeny and morphology of the mouse gut-derived taurine-respiring strain LT0009 that represents the new genus-species Taurinivorans muris in the family Desulfovibrionaceae.webp
From Wikimedia Commons, the free media repository
Jump to navigation
Jump to search
Size of this PNG preview of this WEBP file: 800 × 497 pixels. Other resolutions: 320 × 199 pixels | 640 × 397 pixels | 1,024 × 636 pixels | 1,280 × 795 pixels | 2,000 × 1,242 pixels.
Original file (2,000 × 1,242 pixels, file size: 325 KB, MIME type: image/webp)
File information
Structured data
Captions
Summary[edit]
DescriptionPhylogeny and morphology of the mouse gut-derived taurine-respiring strain LT0009 that represents the new genus-species Taurinivorans muris in the family Desulfovibrionaceae.webp |
English: Phylogeny and morphology of the mouse gut-derived taurine-respiring Desulfovibrionaceae strain LT0009 that represents the new genus/species "Taurinivorans muris" in the family. a 16 S rRNA gene tree and FISH probe coverage. Maximum likelihood branch supports (1000 resamplings) equal to or greater than 95% and 80% are indicated by black and gray circles, respectively. The scale bar indicates 0.1 estimated substitutions per residue. Accession numbers are shown in parentheses. Strain LT0009 is shown in bold and type strains are marked with a superscript ‘T’. Sequence sources are indicated with different colors. Sequences were assigned to "Taurinivorans" and "Taurinivorans muris" based on the genus-level similarity cutoff of 94.5% and species-level similarity cutoff of 98.7%, respectively. The perfect-match coverage of probes TAU1151 for "Taurinivorans" and MAIL1151 for "Mailhella" is indicated. b Phylogenomic tree. Ultrafast bootstrap support values equal to or greater than 95% and 80% for the maximum likelihood tree are indicated with black and gray circles, respectively. Accession numbers are shown in parentheses. Strain LT0009 is shown in bold. Strains with complete genomes (genome size is indicated) are marked with a star. Genomes were assigned to Taurinivorans based on the genus-level AAI cutoff value of 63.4%. The scale bar indicates 0.1 estimated substitutions per residue. c Representative morphology of LT0009 cells in pure culture (n = 3 independent cultures). SEM: Scanning electron microscopy images of cells of varying lengths. White arrows indicate the flagella. FISH: Cells hybridized with Cy3-labeled probe TAU1151 and Fluos-labeled probe EUB338mix and counterstained by DAPI. d Growth of strain LT0009 in modified Desulfovibrio medium confirmed complete utilization of taurine as electron acceptor concomitant with nearly stoichiometric production of sulfide. Electron donors L-lactate and pyruvate were provided in excess, and their utilization also contributed to acetate formation. Pyruvate in the medium and ammonia released from the deamination of taurine were not analyzed in this experiment. Lines represent averages of measures in triplicate cultures. Error bars represent one standard deviation (n = 3 biologically independent cultures). Source data are provided as a Source Data file. |
||
Date | |||
Source | Fig. 1 in Ecophysiology and interactions of a taurine-respiring bacterium in the mouse gut. In: Nature Communications 14, Article number: 5533; doi:10.1038/s41467-023-41008-z | ||
Author | Huimin Ye, Sabrina Borusak, Claudia Eberl, Julia Krasenbrink, Anna S. Weiss, Song-Can Chen, Buck T. Hanson, Bela Hausmann, Craig W. Herbold, Manuel Pristner, Benjamin Zwirzitz, Benedikt Warth, Petra Pjevac, David Schleheck, Bärbel Stecher, Alexander Loy | ||
Other versions |
|
Licensing[edit]
This file is licensed under the Creative Commons Attribution 4.0 International license.
- You are free:
- to share – to copy, distribute and transmit the work
- to remix – to adapt the work
- Under the following conditions:
- attribution – You must give appropriate credit, provide a link to the license, and indicate if changes were made. You may do so in any reasonable manner, but not in any way that suggests the licensor endorses you or your use.
File history
Click on a date/time to view the file as it appeared at that time.
Date/Time | Thumbnail | Dimensions | User | Comment | |
---|---|---|---|---|---|
current | 20:33, 14 December 2023 | 2,000 × 1,242 (325 KB) | Ernsts (talk | contribs) | Uploaded a work by Huimin Ye, Sabrina Borusak, Claudia Eberl, Julia Krasenbrink, Anna S. Weiss, Song-Can Chen, Buck T. Hanson, Bela Hausmann, Craig W. Herbold, Manuel Pristner, Benjamin Zwirzitz, Benedikt Warth, Petra Pjevac, David Schleheck, Bärbel Stecher, Alexander Loy from Fig. 1 in ''Ecophysiology and interactions of a taurine-respiring bacterium in the mouse gut.'' In: ''Nature Communications'' 14, Article number: 5533; doi:10.1038/s41467-023-41008-z with UploadWizard |
You cannot overwrite this file.
File usage on Commons
The following 4 pages use this file: