File:PCA plot for the Japan mainland population and the Okinawa Islanders using different number of loci.png

From Wikimedia Commons, the free media repository
Jump to navigation Jump to search

Original file ‎(2,000 × 1,275 pixels, file size: 578 KB, MIME type: image/png)

Captions

Captions

Add a one-line explanation of what this file represents
Description
English: Principal component analysis plot of the first and second principal components for the mainland population and the Okinawa Islanders in the PASNP data. Principal component analysis was conducted for the mainland population and the Okinawa Islanders in the PASNP (Pan-Asian SNP) data, using (a) all 46485 loci and (b) 5000, (c) 1000, (d) 900 and (e) 800 loci that were randomly selected from all loci. Scree plots are shown in each figure.
Date Published: April 3, 2012
Source Nishiyama T, Kishino H, Suzuki S, Ando R, Niimura H, Uemura H, et al. (2012) Detailed Analysis of Japanese Population Substructure with a Focus on the Southwest Islands of Japan. PLoS ONE 7(4): e35000. doi:10.1371/journal.pone.0035000 http://journals.plos.org/plosone/article?id=10.1371/journal.pone.0035000
Author Takeshi Nishiyama, Hirohisa Kishino, Sadao Suzuki, Ryosuke Ando, Hideshi Niimura, Hirokazu Uemura, Mikako Horita, Keizo Ohnaka, Nagato Kuriyama, Haruo Mikami, Naoyuki Takashima, Keitaro Mastuo, Yin Guang, Kenji Wakai, Nobuyuki Hamajima, Hideo Tanaka, for the J-MICC Study Group
Permission
(Reusing this file)		 This is an open-access article distributed under the terms of the Creative Commons Attribution License
Other versions
  • Geographic locations of the populations
    Geographic locations of the populations
  • Correspondence analysis
    Correspondence analysis
  • Correspondence analysis
    Correspondence analysis
  • PCA
    PCA
  • PCA
    PCA
  • Fst
    Fst
  • Heterozygosity
    Heterozygosity
w:en:Creative Commons
attribution
This file is licensed under the Creative Commons Attribution 2.5 Generic license.
You are free:
  • to share – to copy, distribute and transmit the work
  • to remix – to adapt the work
Under the following conditions:
  • attribution – You must give appropriate credit, provide a link to the license, and indicate if changes were made. You may do so in any reasonable manner, but not in any way that suggests the licensor endorses you or your use.
PLOS
PLOS
This file was published in a Public Library of Science journal. Their website states that the content of all PLOS journals is published under the Creative Commons Attribution 4.0 license (or its previous version depending on the publication date), unless indicated otherwise.

File history

Click on a date/time to view the file as it appeared at that time.

Date/TimeThumbnailDimensionsUserComment
current13:06, 31 January 2017Thumbnail for version as of 13:06, 31 January 20172,000 × 1,275 (578 KB)Was a bee (talk | contribs){{Information |Description={{en|1=Principal component analysis plot of the first and second principal components for the mainland population and the Okinawa Islanders in the PASNP data. Principal component analysis was conducted for the mainland popula...

You cannot overwrite this file.

Retrieved from "https://commons.wikimedia.org/w/index.php?title=File:PCA_plot_for_the_Japan_mainland_population_and_the_Okinawa_Islanders_using_different_number_of_loci.png&oldid=452720477"