File:PCA of HamMap 9 populations.png

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English: Graphical representation of HapMap phase 3 dataset with 9 populations and 1,087 individuals on the principal components space, from PC1 to PC5. We considered small data with 20,000 SNPs and large data with 220 K SNPs randomly chosen among the whole set of SNPs available and in equal number on each of the non-sexual chromosomes. The HapMap dataset is available at http://hapmap.ncbi.nlm.nih.gov/downloads.
Date Published: October 12, 2012
Source Bouaziz M, Paccard C, Guedj M, Ambroise C (2012) SHIPS: Spectral Hierarchical Clustering for the Inference of Population Structure in Genetic Studies. PLoS ONE 7(10): e45685. doi:10.1371/journal.pone.0045685 http://journals.plos.org/plosone/article?id=10.1371/journal.pone.0045685
Author Matthieu Bouaziz , Caroline Paccard, Mickael Guedj, Christophe Ambroise
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PCA of 10 populations of the Pan-Asian dataset
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