File:Most parsimonious tree of haplogroup R7 complete mtDNA sequences observed in the Indian subcontinent.jpg
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English: The most parsimonious tree of haplogroup R7 complete mtDNA sequences observed in the Indian subcontinent. This tree was redrawn manually from the output of median joining/reduced network obtained using NETWORK program (version 4.1) http://www.fluxus-engineering.com. The samples were selected through a preliminary sequence analysis of the control region in order to include the widest possible range of R7 variation, language and geographical groups. Coalescent times were calculated by a calibration method described elsewhere [32]. 16182C, 16183C and 16519 polymorphisms were omitted. Suffixes A, C, G, and T indicate transversions, recurrent mutations are underlined. Synonymous (s) and non-synonymous (ns) mutations are distinguished. DRA-Dravidian, AA-Austro-Asiatic, IE-Indo-European. The ethnic affiliation of the samples is as follows: Lam, Lambadi; As, Asur; Mw, Mawasi; Tor45, Pakistan; Ho, Ho; Ori&A, Oraon; G19, Kanwar; G39, Santhal; G66, Gond; KO, Koya. Two sequences, T35 (Thogataveera) and C35 (Brahmin), were taken from the literature. |
| Date | Published: 04 August 2008 |
| Source |
Gyaneshwer Chaubey et al. Phylogeography of mtDNA haplogroup R7 in the Indian peninsula. BMC Evolutionary Biology20088:227 DOI: 10.1186/1471-2148-8-227 http://bmcevolbiol.biomedcentral.com/articles/10.1186/1471-2148-8-227 |
| Author |
Gyaneshwer Chaubey, Monika Karmin, Ene Metspalu, Mait Metspalu, Deepa Selvi-Rani, Vijay Kumar Singh, Jüri Parik, Anu Solnik, B Prathap Naidu, Ajay Kumar, Niharika Adarsh, Chandana Basu Mallick, Bhargav Trivedi, Swami Prakash, Ramesh Reddy, Parul Shukla, Sanjana Bhagat, Swati Verma, Samiksha Vasnik, Imran Khan, Anshu Barwa, Dipti Sahoo, Archana Sharma, Mamoon Rashid, Vishal Chandra, Alla G Reddy, Antonio Torroni, Robert A Foley, Kumarasamy Thangaraj, Lalji Singh, Toomas KivisildEmail author and Richard Villems BMC Evolutionary Biology20088:227 |
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