File:20-1962-F1.jpg

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Phylogenetic analysis of the coding sequence of hedgehog arterivirus 1.

Summary

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Description
English: Phylogenetic analysis of the coding sequence of hedgehog arterivirus 1. The virus genome was aligned by using the MegAlign software of the DNASTAR Lasergene Core Suite (DNASTAR, Inc., https://www.dnastar.com), and phylogenetic analysis was performed by using MEGA 5.2 software (https://www.megasoftware.net). The rooted tree was constructed by using the neighbor-joining method and 1,000 bootstrap replications. Each virus on the tree is represented by its GenBank accession number and name. Designation of subfamilies was conducted as outlined in the International Committee on Taxonomy of Viruses 2018 release (https://talk.ictvonline.org/ictv-reports). Coronaviruses are included as an outgroup. Solid black circle and bold indicate strain detected in this study. Numbers along branches are bootstrap values. Scale bar indicates nucleotide substitutions per site.
Date
Source Dastjerdi A, Inglese N, Partridge T, Karuna S, Everest DJ, Frossard J, et al. Novel Arterivirus Associated with Outbreak of Fatal Encephalitis in European Hedgehogs, England, 2019. Emerg Infect Dis. 2021;27(2):578-581. https://doi.org/10.3201/eid2702.201962
Author Akbar DastjerdiComments to Author , Nadia Inglese, Tim Partridge, Siva Karuna, David J. Everest, Jean-Pierre Frossard, Mark P. Dagleish, and Mark F. Stidworthy

Licensing

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Public domain
This work is in the public domain in the United States because it is a work prepared by an officer or employee of the United States Government as part of that person’s official duties under the terms of Title 17, Chapter 1, Section 105 of the US Code. Note: This only applies to original works of the Federal Government and not to the work of any individual U.S. state, territory, commonwealth, county, municipality, or any other subdivision. This template also does not apply to postage stamp designs published by the United States Postal Service since 1978. (See § 313.6(C)(1) of Compendium of U.S. Copyright Office Practices). It also does not apply to certain US coins; see The US Mint Terms of Use.

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Date/TimeThumbnailDimensionsUserComment
current00:20, 3 July 2021Thumbnail for version as of 00:20, 3 July 2021900 × 716 (110 KB)Guest2625 (talk | contribs)Uploaded a work by Akbar DastjerdiComments to Author , Nadia Inglese, Tim Partridge, Siva Karuna, David J. Everest, Jean-Pierre Frossard, Mark P. Dagleish, and Mark F. Stidworthy from Dastjerdi A, Inglese N, Partridge T, Karuna S, Everest DJ, Frossard J, et al. Novel Arterivirus Associated with Outbreak of Fatal Encephalitis in European Hedgehogs, England, 2019. Emerg Infect Dis. 2021;27(2):578-581. https://doi.org/10.3201/eid2702.201962 with UploadWizard

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